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연구자

  • 김우태, 이학박사

    조교수

    Integrated and Translational Cancer Research Lab

    순천향의생명연구원 본관동 304호

    041-413-5034

    wootaek@sch.ac.kr

암중개융합연구실 (Integrated and Translational Cancer Research Lab) 

- 유전체 불안정성은 암 발생 및 암 진행에 있어서 주요한 원인의 하나이며 유전체 불안정성은 유전자의 돌연변이가 세포분열을 통해 다음 세대로 전달되고 축적됨으로써 생명체의 정상적인 대사를 방해하며 결과적으로 암 및 유전성 질병들을 초래함

- 항암제를 사용한 치료는 암 치료법 중 매우 일반적이고, 적극적인 치료 방법으로 수술요법이나 방사선 치료요법과는 달리 전신에 적용하는 비특이적 치료 방법임. 따라서 암 부위 이외의 원하지 않는 조직에도 항암제가 영향을 미치며 적지 않은 부작용이 초래됨. 모든 사람들의 세포는 각 유전체 및 환경이 다름에 따라 유전자의 발현 정도 및 활성화 정도가 다름. 따라서 항암제 감수성 및 내성 또한 다르게 나타나며 이에 따른 부작용도 다르게 나타남.    


연구목표

Aim 1. 다양한 cellular stress 상황에서 tumorigenesis 메커니즘 연구

Aim 2. Drug resistance를 조절하는 유전적, 약물학적 인자 발굴

Aim 3. 암환자 세포 유전체 분석 및 메커니즘연구를 통한 personalized therapy 제시

 



 

Essentials of Cancer Genomic, Computational Approaches and Precision Medicine. (2020)


Principle investigator 


 





김우태 (Wootae Kim)

Assistant Professor. Soonchunhyang Institute of Medi-bio Science(SIMS), Soonchunhyang University, Korea

Assistant Professor, Dept. of Pharmacology, Mayo Clinic, USA

Research Fellow, Division of Oncology Research, Mayo Clinic, USA

Postdoctoral Fellow, Dept. of Biomedical Science, Kyung Hee University, Korea


Ph.D. in Biomedical Science, Kyung Hee University, Korea

M.S. in Biomedical Science, Kyung Hee University, Korea

B.S. in Biomedical Science, Inje University, Korea




Graduate Students




 

Jaeyoung Moon

B.S in Biology & Medical Biotechnology, Soonchunhyang University, Korea

Position: Doctoral candidate

 


Grania Christyani

B.S. in Biomedicine, Indonesia International institute for Life Sciences (i3L), Indonesia

Position: Master candidate

 



 

Kusuma Renata

B.S. in Department of Biotechnology, Atma Jaya Catholic University of Indonesia, Indonesia

M.S in Department of Biotechnology, Atma Jaya Catholic University of Indonesia, Indonesia

Position: Doctoral candidate

 



 

Hyorin Lee

B.S in Horticultural industry, Wonkwang University, Korea

Position: Master candidate

 


Ichiwa Kitty

B.S. in Department of Biotechnology, Atma Jaya Catholic University of Indonesia, Indonesia

Position: Master candidate

[Corresponding Author’s Article]

5. Christyani G, Carswell M, Qin S, Kim W. An Overview of Advances in Rare Cancer Diagnosis and Treatment. International Journal of Molecular Sciences. 2024



4. Qu Y, Qin S, Yang Z, Li Z, Liang Q, Long T, Wang W, Zeng D, Zhao Q, Dai Z, Ni Q, Zhao F, Kim W*, Hou J*. Targeting the DNA repair pathway for breast cancer therapy: Beyond the molecular subtypes.


Biomedicine & Pharmacotherapy. 2023



3. Qin S, Kitty I, Hao Y, Zhao F*, Kim W*. Maintaining Genome Integrity: Protein Kinases and Phosphatases Orchestrate the Balancing Act of DNA Double-Strand Breaks Repair in Cancer. International

Journal of Molecular Sciences. 2023


2. Moon J, Kitty I, Renata K, Qin S, Zhao F*, Kim W*. DNA Damage and Its Role in Cancer Therapeutics. International Journal of Molecular Sciences. 2023



1. Chen L, Hou J, Guo Q, Zeng X, Deng M, Zhao F, Wu M, Tu X, Kloeber J, Huang J, Luo K, Yin P, Kim W*, Lou Z*. LRRK2 inhibition potentiates PARP inhibitor cytotoxicity through inhibiting homologous

recombination-mediated DNA double strand break repair. Clinical and Translational Medicine. 202



 

[First Author’s Articles]

12. Zhao F*, Kim W*, Lou Z. Yuan J. ASTE1 Orchestrates Shieldin Complex Mediated DNA Repair by Attenuating End Resection. Nature Cell Biology. 2021 (IF 28.824)

 

11. Kim W*, Zhao F*, Gao H, Qin S, Deng M, Kloeber J, Huang J, Zhou Q, Guo G, Gao M, Tu X, Zeng X, Zhu S, Wu Z, Yin P, Kaufmann S, Luo K, Lou Z. USP13 regulates the replication stress response by deubiquitinating TopBP1. DNA repair. (Amst). 2021 (IF 4.913)

 

10. Zhao F*, Kim W*, Kloeber JA, Lou Z. DNA end resection and its role in DNA replication and DSB repair choice in mammalian cells. Experimental and Molecular Medicine. 2020 (IF 8.718)

 

9. Kim W, Zhao F, Wu R, Nowsheen S, Huang J, Zhou Q, Qin S, Chen Y, Deng M, Guo G, Luo K, Yuan J, Lou Z. Zinc finger protein 161 regulates replication fork stability and maintenance of genomic stability by recruiting the ATR/ATRIP complex. Nature Communications. 2019 (IF 14.919)

 

8. Kim W, Ryu J, Kim JE. CCAR2/DBC1 and Hsp60 Positively Regulate Expression of Survivin in Neuroblastoma Cells. International Journal of Molecular Sciences. 2019 (IF 5.923)

 

7. Kim W, Pyo J, Byeong-Joo Noh, Joo-Won Jeong, Juhie Lee, Kim JE. CCAR2 negatively regulates IL-8 production in cervical cancer cells. Oncotarget. 2017

 

6. Kim W, Cheon MG, Kim JE. Mitochondrial CCAR2/DBC1 and its binding partner Hsp60 protect neuroblastoma cells from mitochondrial stress. Biochemical and Biophysical Research Communications. 2017 (IF 3.575)

 

5. Kim W, Jeong JW, Kim JE. CCAR2 deficiency augments genotoxic stress-induced apoptosis in the presence of melatonin in non-small cell lung cancer cells. Tumor Biology. 2014

 

4. Kim W, Choi MJ, Kim JE. The histone methyltransferase Dot1/DOT1L as a critical regulator of the cell cycle. Cell Cycle. 2014 (IF 4.534)

 

3. Kim W, Kim JE. Sirtuin 7 is an emerging sirtuin: Deciphering newer roles. Journal of Physiology and Pharmacology. 2013 (IF 3.011)

 

2. Kim W, Kim JE. Deleted in breast cancer 1 (DBC1) deficiency results in apoptosis of breast cancer cells through impaired responses to UV-induced DNA damage. Cancer Letters. 2013 (IF 8.679)

 

1. Kim W, Park G, Kim R, Park JW, Kim JE. The deficiency of H3K79 histone methyltransferase DOT1L inhibits cell proliferation. Journal of Biological Chemistry. 2012 (IF 5.157)


[Co-author’s Articles]


20. Huang J, Wu C, Kloeber JA, Gao H, Gao M, Zhu Q, Chang Y, Zhao F, Guo G, Luo K, Dai H, Liu S, Huang Q, Kim W, Zhou Q, Zhu S, Wu Z, Tu X, Yin P, Deng M, Wang L, Yuan J, Lou Z. SLFN5-mediated chro         

       matin dynamics sculpt higher-order DNA repair topology. Molecular Cell. 2023



19. Zeng X, Zhao F, Cui G, Zhang Y, Deshpande RA, Chen Y, Deng M, Kloeber JA, Shi Y, Zhou Q, Zhang C, Hou J, Kim W, Tu X, Yan Y, Xu Z, Chen L, Gao H, Guo G, Liu J, Zhu Q, Cao Y, Huang J, Wu Z, Zhu S,


       Yin P, Luo K, Mer G, Paull TT, Yuan J, Tao K, Lou Z. METTL16 antagonizes MRE11-mediated DNA end resection and confers synthetic lethality to PARP inhibition in pancreatic ductal adenocarcinoma.


      Nature Cancer. 2022



18. Qin S, Gao H, Kim W, Zhang H, Gu Y, Kalari KR, Sinnwell JP, Scholz JA, Xie F, Yin P, Yu J, Qin B, Zhuang Y, Wei L, Tan W, Bryce AH, Weinshilboum RM, Wang L. Biomarkers for Predicting Abiraterone


      Treatment Outcome and Selecting Alternative Therapies in Castration-Resistant Prostate Cancer. Clinical Pharmacology & Therapeutics. 2022



17. Zhang Y, Yang Q, Zeng X, Wang M, Dong S, Yang B, Tu X, Wei T, Xie W, Zhang C, Guo Q, Kloeber JA, Cao Y, Guo G, Zhou Q, Zhao F, Huang J, Liu L, Zhang K, Wang M, Yin P, Luo K, Deng M, Kim W, Hou J,

       

      Shi Y, Zhu Q, Chen L, Hu S, Yue J, Pi G, Lou Z. MET Amplification Attenuates Lung Tumor Response to Immunotherapy by Inhibiting STING. Cancer Discovery. 2021



16. Qin S, Ingle JN, Kim W, Gao H, Weinshilboum RM, Wang L. ZNF423 modulates the AMP-activated protein kinase pathway and metformin response in a single nucleotide polymorphisms, estrogen

 

      and selective estrogen receptor modulator dependent fashion. Pharmacogenetics and Genomics. 2021



15. Guo G, Gao M, Gao X, Zhu B, Huang J, Tu X, Kim W, Zhao F, Zhou Q, Zhu S, Wu Z, Yan Y, Zhang Y, Zeng X, Zhu Q, Yin P, Luo K, Sun J, Deng M, Lou Z. Reciprocal regulation of RIG-I and XRCC4 connects 


       DNA repair with RIG-I immune signaling. Nature Communications. 2021



14. Gao M, Guo G, Huang J, Hou X, Ham H, Kim W, Zhao F, Tu X, Zhou Q, Zhang C, Zhu Q, Liu J, Yan Y, Xu Z, Yin P, Luo K, Weroha J, Deng M, Billadeau DD, Lou Z. DOCK7 protects against replication stress


      by promoting RPA stability on chromatin. Nucleic Acids Research. 2021



13. Zhu S, Chen Z, Jiang D, Wang R, Cheng X, Li D, Xv Q, Zhao F, Kim W, Guo G, Zhao C, Lou Z, Liu H. Mixed-lineage leukemia protein modulates the loading of let-7a onto AGO1 by recruiting RAN.


       Haematologica. 2021



12. Yan Y, Xu Z, Huang J, Guo G, Gao M, Kim W, Zeng X, Kloeber JA, Zhu Q, Zhao F, Luo K, Lou Z. The deubiquitinase USP36 Regulates DNA replication stress and confers therapeutic resistance through


       PrimPol stabilization. Nucleic Acids Research. 2020



11. Gao M, Guo G, Huang J, Kloeber JA, Zhao F, Deng M, Tu X, Kim W, Zhou Q, Zhang C, Yin P, Luo K, Lou Z. USP52 regulates DNA end resection and chemosensitivity through removing inhibitory

     

      ubiquitination from CtIP. Nature Communications. 2020



10. Huang J, Zhou Q, Gao M, Nowsheen S, Zhao F, Kim W, Zhu Q, Kojima Y, Yin P, Zhang Y, Guo G, Tu X, Deng M, Luo K, Qin B, Machida Y, Lou Z. Tandem Deubiquitination and Acetylation of SPRTN Pro


        motes DNA-Protein Crosslink Repair and Protects against Aging. Molecular Cell. 2020



9. Zhou Q, Huang J, Zhang C, Zhao F, Kim W, Tu X, Zhang Y, Nowsheen S, Zhu Q, Deng M, Chen Y, Qin B, Luo K, Liu B, Lou Z, Mutter RW, Yuan J. The bromodomain containing protein BRD-9 orchestrates


     RAD51-RAD54 complex formation and regulates homologous recombination-mediated repair. Nature Communications. 2020



8. Chen Y, Wu J, Liang G, Geng G, Zhao F, Yin P, Nowsheen S, Wu C, Li Y, Li L, Kim W, Zhou Q, Huang J, Liu J, Zhang C, Guo G, Deng M, Tu X, Gao X, Liu Z, Chen Y, Lou Z, Luo K, Yuan J. CHK2-FOXK axis pro


     motes transcriptional control of autophagy programs. Science Advances. 2020



7. Song Z, Tu X, Zhou Q, Huang J, Chen Y, Liu J, Lee S, Kim W, Nowsheen S, Luo K, Yuan J, Lou Z. A novel UCHL3 inhibitor, perifosine, enhances PARP inhibitor cytotoxicity through inhibition of homolog


     ous recombination-mediated DNA double strand break repair. Cell Death & Disease. 2019



6. Wu J, Chen Y, Geng G, Li L, Yin P, Nowsheen S, Li Y, Wu C, Liu J, Zhao F, Kim W, Zhou Q, Huang J, Guo G, Zhang C, Tu X, Gao X, Lou Z, Luo K, Qiao H, Yuan J. USP39 regulates DNA damage response

   

    and chemo-radiation resistance by deubiquitinating and stabilizing CHK2. Cancer Letters. 2019



5. Pyo J, Ryu J, Kim W, Choi JS, Jeong JW, Kim JE. The Protein Phosphatase PPM1G Destabilizes HIF-1α Expression. International Journal of Molecular Sciences. 2018




4. Min YH, 
Kim W, Kim JE.
The Aurora kinase A inhibitor TC-A2317 disrupts mitotic progression and inhibits cancer cell proliferation. Oncotarget. 2016




3. Lee SD, Kim W, Jeong JW, Park JW, Kim JE. AK-1, a SIRT2 inhibitor, destabilizes HIF-1α and diminishes its transcriptional activity during hypoxia. Cancer Letters. 2016




2. Choi M, Kim W, Cheon MG, Lee CW, Kim JE. Polo-like kinase 1 inhibitor BI2536 causes mitotic catastrophe following activation of the spindle assembly checkpoint in non-small cell lung cancer cells.


    Cancer Letters. 2015



1. Cheon MG, 
Kim W, Choi M, Kim JE.
AK-1, a specific SIRT2 inhibitor, induces cell cycle arrest by downregulating Snail in HCT116 human colon carcinoma cells. Cancer Letters. 2015